Information for 1-CTTCAARGAAGC (Motif 1)

A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A G T C G A C T A G C T A C G T A T C G C G T A G C T A C T A G
p-value:1e-13
log p-value:-3.098e+01
Information Content per bp:1.807
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif67.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets69.4 +/- 57.5bp
Average Position of motif in Background100.1 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:reverse strand
Alignment:CTTCAARGAAGC
------NGAAGC
 A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTTCAARGAAGC--
TTTCCAGGAAATGG
 A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTTCAARGAAGC-
TAATTCAATGAAGTG
 A C G T A C G T A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTCAARGAAGC
TTTCCNGGAAAN
 A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTTCAARGAAGC
NNCTTCCNGGAAGN
 A C G T A C G T A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTTCAARGAAGC
--AVCAGGAAGT
 A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTCAARGAAGC
ATTTCCAAGAA--
 A C G T A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTTCAARGAAGC
--ANCAGGAAGT
 A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTCAARGAAGC
ACATCAAAGG---
 A C G T A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTCAARGAAGC
TTTCCCAGAAN-
 A G T C C A G T C G A T A T G C C G T A C T G A C T G A A C T G G T C A C G T A A C T G A G T C
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T