Information for 9-AAAAGCAAATTG (Motif 10)

T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G
Reverse Opposite:
G T A C C G T A G C T A G C A T A G C T C G A T T A C G G A T C G A C T A G C T G C A T A C G T
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.721
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.22%
Number of Background Sequences with motif763.1
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets100.8 +/- 59.6bp
Average Position of motif in Background99.7 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAAGCAAATTG
ATATGCAAAT--
 T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAAGCAAATTG-
ATATGCAAATNNN
 T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

POU5F1/MA1115.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAAAGCAAATTG
ATATGCAAATT-
 T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAAAGCAAATTG
TTATGCAAAT--
 T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAAGCAAATTG
AATATGCAAATT-
 A C G T T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAAGCAAATTG
-TATGCAAATC-
 T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G
A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAAAGCAAATTG--
TTGTATGCAAATTAGA
 A C G T A C G T T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAAGCAAATTG
TTATGCAAATTA
 T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGCAAATTG-
GGAAANTGAAACTNA
 A C G T A C G T T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGCAAATTG
GAAAMTGAAACT-
 A C G T T G C A C G T A C T G A C T G A C T A G A T G C C G T A C T G A C G T A C G A T G C A T C A T G
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T