Information for 13-CAAGGAGAAAAT (Motif 15)

G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
Reverse Opposite:
C G T A A C G T A G C T A G C T A G C T A T G C A C G T A G T C A G T C A C G T A G C T A C T G
p-value:1e-9
log p-value:-2.204e+01
Information Content per bp:1.866
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif88.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets84.6 +/- 58.6bp
Average Position of motif in Background98.8 +/- 68.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAGGAGAAAAT
CAAGGHCANV--
 G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAAGGAGAAAAT
GAAAGTGAAAGT
 G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAGAAAAT
BTCAAGGTCA----
 A C G T A C G T G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAGGAGAAAAT--
ARGAGGMCAAAATGW
 A C G T G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAGAAAAT
NTCAAGGTCA----
 A C G T A C G T G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAAGGAGAAAAT
--AGGTGTTAAT
 G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

IRF7/MA0772.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAGAAAAT
ACGAAAGCGAAAGT
 A C G T A C G T G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAAGGAGAAAAT
--ANCAGGAAGT
 G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAAGGAGAAAAT
NBYCAAGGTCAC---
 A C G T A C G T A C G T G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T A C G T A C G T

PRDM1/MA0508.2/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAAGGAGAAAAT--
----GTGAAAGTGA
 G T A C C T G A C G T A C T A G C T A G C G T A A T C G C T G A C T G A C T G A G T C A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T A C T G C G T A G C T A G T C A C T A G A G C T C T A G C G T A