Information for 14-TTAGTATTAAAA (Motif 16)

A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T G T C A C G T A C G A T C G T A T A G C C G A T C T G A C G T A
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.867
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif92.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets111.5 +/- 63.9bp
Average Position of motif in Background99.6 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTAGTATTAAAA-
AATATTAATAAAGA
 A C G T A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TTAGTATTAAAA
-----ATTAAA-
 A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTAGTATTAAAA----
-CCGTATTATAAACAA
 A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTAGTATTAAAA------
---GTATAAAAGGCGGGG
 A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTAGTATTAAAA------
---GTATAAAAGGCGGGG
 A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Arid3b/MA0601.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTAGTATTAAAA-
--NTAATTAATAT
 A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTAGTATTAAAA-
----NATTCAAAT
 A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTAGTATTAAAA--
ATTTGCATAACAATG
 A C G T A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTAGTATTAAAA-
---GTCATAAAAN
 A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTAGTATTAAAA-
--GGTAATAAAAA
 A C G T G A C T C G T A A T C G C G A T C G T A A C G T C A G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A