Information for 6-TCACTTGTCC (Motif 18)

A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C
Reverse Opposite:
C T A G A C T G G T C A G A T C G T C A C G T A C T A G A C G T A C T G T G C A
p-value:1e-9
log p-value:-2.131e+01
Information Content per bp:1.653
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif6.75%
Number of Background Sequences with motif1292.5
Percentage of Background Sequences with motif2.59%
Average Position of motif in Targets95.1 +/- 55.3bp
Average Position of motif in Background100.0 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes2/MA0616.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCACTTGTCC---
GCACGTGTCNNNN
 A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C A C G T A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TCACTTGTCC--
TCACGTGACCGG
 A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C A C G T A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCACTTGTCC
GTCACGTGGM-
 A C G T A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

MITF/MA0620.2/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TCACTTGTCC---
NNAGGTCACGTGACCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C A C G T A C G T A C G T
G C A T C T G A C G T A C T A G T C A G A G C T T A G C G C T A A G T C T C A G C G A T A T C G T C G A A G T C G A T C G C A T G A C T C G T A

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCACTTGTCC-
-CACGTGTGCH
 A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C A C G T
A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCACTTGTCC
TCACGTGACC
 A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

USF2/MA0526.2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCACTTGTCC---
NNGCCACGTGACCNNN
 A C G T A C G T A C G T A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C A C G T A C G T A C G T
A C T G T C A G T C A G G A T C T G A C C T G A A G T C T C A G A G C T A T C G C T G A A G T C G A T C G A T C T A G C T A C G

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCACTTGTCC----
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCACTTGTCC
GGTCACGTGGC-
 A C G T A C G T A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCACTTGTCC
ACCACTTGAA-
 A C G T A C G T T G A C T G C A G A T C G C A T C A G T C T A G C A G T T G A C G A T C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T