Information for 2-AAGAGARYTTGT (Motif 2)

C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T
Reverse Opposite:
C G T A A G T C C T G A C T G A C T G A A G T C A C G T A T G C G A C T A G T C A C G T G A C T
p-value:1e-12
log p-value:-2.890e+01
Information Content per bp:1.795
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif238.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets98.8 +/- 52.4bp
Average Position of motif in Background99.9 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGAGARYTTGT------
-GGAAAAATTGTTAGGAA
 C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGARYTTGT
GAAAGTGAAAGT--
 A C G T A C G T C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AAGAGARYTTGT-
-------ATTGTT
 C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAGAGARYTTGT
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C G T C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:AAGAGARYTTGT----
-------ATTGTTTAN
 C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGAGARYTTGT
AGGVNCCTTTGT
 C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AAGAGARYTTGT------
----AAAATTGTTATGAA
 C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAGAGARYTTGT---
-----CCATTGTTNY
 C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AAGAGARYTTGT---
YDGHTACAWTGTADC
 C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAGAGARYTTGT
RHHCAGAGAGGB---
 A C G T A C G T A C G T C T G A C G T A C T A G C T G A A T C G C G T A C T A G G A C T A G C T A G C T C T A G A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T