Information for 9-AACAATAAAG (Motif 21)

T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G
Reverse Opposite:
T A G C C A G T C G A T C A G T C G T A A G C T A C G T A C T G A G C T A G C T
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.837
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.97%
Number of Background Sequences with motif804.5
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets106.9 +/- 58.2bp
Average Position of motif in Background100.3 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----AACAATAAAG--
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:2
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----AACAATAAAG--
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----AACAATAAAG-
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------AACAATAAAG
NTTNAGAACAATTA--
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AACAATAAAG
NAACAAT----
 A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AACAATAAAG
AACAAT----
 T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.77
Offset:-7
Orientation:forward strand
Alignment:-------AACAATAAAG-----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------AACAATAAAG
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----AACAATAAAG-
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

SOX15/MA1152.1/Jaspar

Match Rank:10
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AACAATAAAG
AAAACAATAG--
 A C G T A C G T T C G A C T G A G T A C C G T A C T G A C G A T G T C A C G T A G T C A A T C G
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T