Information for 3-TAATGTATAGCA (Motif 3)

A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G A T C T G A
p-value:1e-12
log p-value:-2.840e+01
Information Content per bp:1.889
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.4 +/- 32.8bp
Average Position of motif in Background122.8 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTATAGCA
TTAATGTTTAACC
 A C G T A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TAATGTATAGCA
---TGTCTAGA-
 A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAATGTATAGCA
TGATTTATGGCC
 A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTATAGCA
NTGATTTATGGCC
 A C G T A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTATAGCA
TCTATTTTTAGA-
 A C G T A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TAATGTATAGCA-
TNNATTATGCATANNTT
 A C G T A C G T A C G T A C G T A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTATAGCA
TTAATNATTAAC-
 A C G T A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTATAGCA
GCTATTTATAGC-
 A C G T A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTATAGCA
TCTATTTATAGN-
 A C G T A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TAATGTATAGCA-
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A G C T C G T A C G T A A C G T A C T G A C G T G T C A C G A T C G T A C T A G A G T C C G T A A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T