Information for 20-TAGCAGGGTC (Motif 34)

C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C
Reverse Opposite:
T C A G G T C A A G T C A G T C A G T C A C G T A C T G A G T C A G C T C G T A
p-value:1e-5
log p-value:-1.274e+01
Information Content per bp:1.869
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif338.1
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets117.0 +/- 51.8bp
Average Position of motif in Background101.4 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TAGCAGGGTC--
--NRRGGGTCTT
 C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAGCAGGGTC-----
AGAGCGGGGTCAAGTA
 A C G T C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGCAGGGTC
CACAGCAGGGGG
 A C G T A C G T C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAGCAGGGTC--
SDGCAGGTGCNS
 C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAGCAGGGTC-----
CGCGCCGGGTCACGTA
 A C G T C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGCAGGGTC
CTTGGCAA----
 A C G T A C G T C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAGCAGGGTC
VGCTGGCA-----
 A C G T A C G T A C G T C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TAGCAGGGTC---
---CAAGGHCANV
 C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAGCAGGGTC--
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAGCAGGGTC
NNTTGGCANN---
 A C G T A C G T A C G T C G A T C T G A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T