Information for 6-TTGAAGATTACT (Motif 7)

A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
Reverse Opposite:
C G T A A C T G C G A T G T C A C G T A A C G T A G T C A C G T G A C T A G T C C G T A C G T A
p-value:1e-11
log p-value:-2.642e+01
Information Content per bp:1.884
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets82.8 +/- 57.4bp
Average Position of motif in Background129.2 +/- 38.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTGAAGATTACT
---RGGATTAR-
 A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTGAAGATTACT
-NGAAGC-----
 A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTGAAGATTACT
---AAGGTCAC-
 A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTGAAGATTACT
---NGGATTAA-
 A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTGAAGATTACT-
TAATGATGATCACTA
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTGAAGATTACT
GGTTAAACATTAA-
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTGAAGATTACT
---AAGCTTG--
 A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTGAAGATTACT----
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTGAAGATTACT
--VRGGATTARN
 A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTGAAGATTACT
--GNGGATTAGN
 A C G T A C G T A C T G C G T A C G T A A C T G T C G A A C G T A C G T C G T A A G T C C G A T
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G