Information for 7-TCTGGCATAAAA (Motif 8)

C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T C G A T A C G T A C G T T G C A A C G T A T C G A G T C A G T C C G T A C T A G C G T A
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.883
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif54.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets73.9 +/- 44.9bp
Average Position of motif in Background98.5 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCATAAAA
GGTCTGGCAT----
 A C G T A C G T C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TCTGGCATAAAA-
---GTCATAAAAN
 C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCTGGCATAAAA
-AAGCCATAAAA
 C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A
A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTGGCATAAAA-----
ACGGCCATAAAATTAAT
 C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCTGGCATAAAA
--KGCCATAAAA
 C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTGGCATAAAA
---GCAATAAAA
 C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCTGGCATAAAA--
CAATTGCAAAAATAT
 A C G T C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCTGGCATAAAA-
--GGTAATAAAAA
 C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCTGGCATAAAA
--VGCCATAAAA
 C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTGGCATAAAA----
TAGGTAATAAAATTCA
 C G A T A G T C A C G T A C T G C T A G A T G C C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A