Information for 8-TGCCCCATAAAR (Motif 9)

A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A
Reverse Opposite:
G A C T A C G T C G A T A C G T G T C A A C G T C A T G A C T G C T A G A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.790
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif17.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets95.0 +/- 56.6bp
Average Position of motif in Background105.1 +/- 54.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TGCCCCATAAAR
--CCYMATAAAA
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:TGCCCCATAAAR-
---CCAATAAAAC
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCCATAAAR
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGCCCCATAAAR-
---CCAATAAAAA
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A A C G T
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGCCCCATAAAR-
---CCAATAAAAA
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A A C G T
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGCCCCATAAAR
--NCYAATAAAA
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A
A C G T A C G T C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCCCCATAAAR----
AACCCAATAAAATTCG
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TGCCCCATAAAR-
---CYHATAAAAN
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A A C G T
A C G T A C G T A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGCCCCATAAAR
--VGCCATAAAA
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A
A C G T A C G T T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGCCCCATAAAR
--NGCAATTAAA
 A C G T T C A G A G T C A G T C A G T C G T A C G T C A A C G T G T C A C G T A T C G A C T G A
A C G T A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A