Information for 4-TGTCCACTGT (Motif 7)

A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C G T A C T G A C T G C G T A A G T C C G T A
p-value:1e-11
log p-value:-2.646e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif47.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets77.2 +/- 54.5bp
Average Position of motif in Background118.5 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TGTCCACTGT
-ATCCAC---
 A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTCCACTGT--
-NNCCATTGTNN
 A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGTCCACTGT
ATTTTCCATT--
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGTCCACTGT---
---CCATTGTTYB
 A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGTCCACTGT---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGTCCACTGT-
---CCTTTGTT
 A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTCCACTGT
TYTGACCASWRG
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

MYB/MA0100.3/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTCCACTGT-
-ACCAACTGTC
 A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T
A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGTCCACTGT--
--NCCATTGTTC
 A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTCCACTGT--
---CCATTGTTC
 A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C