Information for 6-GTGTGCATTT (Motif 9)

A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T
Reverse Opposite:
C G T A G C T A C T G A C G A T C T A G A G T C G T C A G T A C C G T A G T A C
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.744
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif20.51%
Number of Background Sequences with motif294.5
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets83.6 +/- 49.3bp
Average Position of motif in Background105.0 +/- 69.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCATTT
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GTGTGCATTT
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GTGTGCATTT-
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTGTGCATTT--
-TGTGGATTNNN
 A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGCATTT
NATTTGCATNN
 A C G T A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTGTGCATTT-
NNTGTGGATTSS
 A C G T A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGCATTT
NGTGGGCAT--
 A C G T A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:8
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------GTGTGCATTT
TTTTCAGTGTGTGCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGTGCATTT
CTGTTCCTGG
 A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTGTGCATTT---
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C T A G A G T C G C T A A G C T C G A T G C A T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A