Information for 19-AACTCACAGAGT (Motif 12)

C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T A T G C A C G T A C T G A C G T A C T G C G T A A C T G A C G T A C G T
p-value:1e-14
log p-value:-3.226e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif4.09%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets125.4 +/- 47.7bp
Average Position of motif in Background129.7 +/- 44.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AACTCACAGAGT
AAACCACAGAN-
 C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACTCACAGAGT-
AAAAATAACAAACGG
 A C G T A C G T C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AACTCACAGAGT
--TTMACACCTT
 C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AACTCACAGAGT
----CACAGN--
 C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AACTCACAGAGT
TCCAATCCACA----
 A C G T A C G T A C G T C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AACTCACAGAGT
CAAATCACTG---
 A C G T C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AACTCACAGAGT
AAATCACAGCA-
 C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AACTCACAGAGT-
-RHHCAGAGAGGB
 C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T A C G T
A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AACTCACAGAGT-
--AAAACAAAGAA
 C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T A C G T
A C G T A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

VDR/MA0693.2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AACTCACAGAGT
TGAACTCA------
 A C G T A C G T C G T A G T C A A G T C A C G T G T A C C G T A A G T C C G T A A T C G C G T A A T C G A C G T
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T