Information for 20-AGAAGCATTCTC (Motif 13)

C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C
Reverse Opposite:
A T C G C G T A A T C G C T G A T C G A A C G T A C T G A G T C A C G T A C G T A G T C A G C T
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.883
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets106.7 +/- 51.6bp
Average Position of motif in Background72.4 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGAAGCATTCTC
NGAAGC------
 C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGAAGCATTCTC------
---AGTATTCTCGGTTGC
 C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGAAGCATTCTC------
---NNAATTCTCGNTNAN
 C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AGAAGCATTCTC
NNNTTAGGTAGCNTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGAAGCATTCTC
--AAGCTTG---
 C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGAAGCATTCTC
---CTCATTGTC
 C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGAAGCATTCTC--
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AGAAGCATTCTC------
---ACCACTCTCGGTCAC
 C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGAAGCATTCTC-
NNGCACCTTTCTCC
 A C G T C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGAAGCATTCTC
--AAGCACTTAA
 C T G A A C T G C G T A C G T A A C T G G T A C C G T A A C G T A G C T A T G C A C G T A T G C
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A