Information for 22-TTTGAAACACTC (Motif 15)

A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
Reverse Opposite:
A C T G C G T A T A C G C G A T A T C G A C G T A G C T A C G T A T G C G T C A C G T A C T G A
p-value:1e-11
log p-value:-2.582e+01
Information Content per bp:1.774
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif7.02%
Number of Background Sequences with motif155.9
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets86.9 +/- 54.8bp
Average Position of motif in Background104.8 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTTGAAACACTC
TTTGAAACCG--
 A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAACACTC
ATTTGAATT----
 A C G T A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTGAAACACTC
-TTGCAACATN-
 A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTGAAACACTC
NTTGATACATT-
 A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAACACTC
CCTTTGATGT----
 A C G T A C G T A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTGAAACACTC
CCTTTGATST----
 A C G T A C G T A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTTGAAACACTC
ACTGAAACCA--
 A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TTTGAAACACTC---
----AGCCACTCAAG
 A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TTTGAAACACTC--
AATNTTGATACCCTATN
 A C G T A C G T A C G T A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------TTTGAAACACTC
NNTTCCTTTGATCTANA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A C G T A T C G C G T A C T G A G T C A T A G C G C T A A T G C C G A T T G A C
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A A C G T