Information for 8-TTCCATTCAATG (Motif 3)

A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G
Reverse Opposite:
A T G C C G T A C A G T A C G T C T A G C G T A C G T A C G A T A C T G A C T G C T G A G T C A
p-value:1e-43
log p-value:-1.013e+02
Information Content per bp:1.795
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif16.96%
Number of Background Sequences with motif91.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets102.0 +/- 52.3bp
Average Position of motif in Background86.9 +/- 85.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTCCATTCAATG---
AATCAATTCAATAATT
 A C G T A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATTCAATG-
ATTTGCATACAATGG
 A C G T A C G T A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTCCATTCAATG-
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTCCATTCAATG
ATTTTCCATT-----
 A C G T A C G T A C G T A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTCCATTCAATG-----
--TAATTCAATGAAGTG
 A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTCCATTCAATG
-CACATTCCAT-
 A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTCCATTCAATG
ATTTTCCATT-----
 A C G T A C G T A C G T A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCCATTCAATG
ATTTTCCATT-----
 A C G T A C G T A C G T A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCCATTCAATG--
TNCCATATATGGNA
 A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCCATTCAATG
TNCCATATATGG
 A C G T G A C T A G T C A G T C C G T A A C G T C G A T A G T C G T C A G T C A A C G T A T C G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G