Information for 10-TCAAHCCGAGTG (Motif 4)

A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G
Reverse Opposite:
A G T C C T G A A G T C A C G T G T A C A C T G C T A G C A T G C G A T A C G T A C T G C G T A
p-value:1e-33
log p-value:-7.746e+01
Information Content per bp:1.808
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif7.02%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets121.2 +/- 53.7bp
Average Position of motif in Background137.2 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TCAAHCCGAGTG---
-----TTRAGTGSYK
 A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCAAHCCGAGTG---
-----TTGAGTGSTT
 A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCAAHCCGAGTG--
----BTBRAGTGSN
 A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCAAHCCGAGTG--
----CTYRAGTGSY
 A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCAAHCCGAGTG---
----CTTGAGTGGCT
 A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCAAHCCGAGTG-
----NTCAAGTGG
 A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCAAHCCGAGTG--
--RHHCAGAGAGGB
 A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T A C G T
A C G T A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

POL001.1_MTE/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCAAHCCGAGTG-----
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCAAHCCGAGTG-----
-AAATTCAAGTGGNTTN
 A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCAAHCCGAGTG
CCATCAATCAAA---
 A C G T A C G T A C G T A C G T T A G C C G T A C G T A G A T C G A T C T G A C C A T G C G T A C T A G A G C T A C T G
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T