Information for 12-CCCCTGTAGGCA (Motif 10)

A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T C T G A A G T C C G T A A C T G C T A G C T A G C T A G
p-value:1e-20
log p-value:-4.766e+01
Information Content per bp:1.887
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.83%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.2 +/- 49.5bp
Average Position of motif in Background147.7 +/- 43.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGTAGGCA
TGCCCTGAGGGCA
 A C G T A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTGTAGGCA
TGCCCNNAGGGCA
 A C G T A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:-9
Orientation:forward strand
Alignment:---------CCCCTGTAGGCA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGTAGGCA
TGCCCTGAGGGCA
 A C G T A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCCCTGTAGGCA
TGCCCCCGGGCA
 A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCCTGTAGGCA
TGCCCCAGGGCA
 A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGTAGGCA-
TCACCTCTGGGCAG
 A C G T A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCCCTGTAGGCA
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCCTGTAGGCA-
TTGCCCTAGGGCAT
 A C G T A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCCTGTAGGCA
TGCCCCAGGGCA
 A G T C A G T C A G T C A G T C C G A T C T A G A G C T C G T A A C T G A C T G A G T C C G T A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A