Information for 24-GGATTTCTTC (Motif 19)

A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G C G T A C G T A C G T A A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif25.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets36.8 +/- 42.8bp
Average Position of motif in Background72.3 +/- 69.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGATTTCTTC--
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGATTTCTTC-----
-TTTTTTTTCNNGTN
 A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGATTTCTTC--
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGATTTCTTC-
-----GCTTCC
 A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGATTTCTTC--
--ATTTCCTGTN
 A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGATTTCTTC
NGGGATTA----
 A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGATTTCTTC
CNGTGATTTN---
 A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGATTTCTTC
GGGAATTTCC--
 A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGATTTCTTC--
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGATTTCTTC--
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C