Information for 23-MBAGTCCATGGA (Motif 22)

G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A
Reverse Opposite:
A G C T G T A C A G T C T G C A A G C T A C T G C T A G C T G A G A T C G A C T T A C G C A T G
p-value:1e-5
log p-value:-1.361e+01
Information Content per bp:1.707
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif408.1
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets133.5 +/- 64.9bp
Average Position of motif in Background96.7 +/- 78.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:MBAGTCCATGGA--
--AGGTCAAGGTCA
 G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MBAGTCCATGGA
TGAGTTCA----
 G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:MBAGTCCATGGA---
----TTCTTGGAAAN
 G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-MBAGTCCATGGA----
NNTATTACATGTANNNT
 A C G T G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:MBAGTCCATGGA-----
TAAATACATGTAAAATT
 G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:MBAGTCCATGGA-----
AAAATACATGTAAAAAT
 G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:MBAGTCCATGGA-----
AAAATACATGTAATACT
 G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:MBAGTCCATGGA--
---CTTCTGGGAAA
 G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----MBAGTCCATGGA
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-MBAGTCCATGGA
CAAAGKTCAA---
 A C G T G T A C A T G C C T G A C T A G A G C T G A T C A G T C C T G A A C G T A C T G A C T G C T G A
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T