Information for 25-AACTATATATTA (Motif 24)

C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T
p-value:1e-4
log p-value:-9.931e+00
Information Content per bp:1.966
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.0 +/- 46.5bp
Average Position of motif in Background125.2 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AACTATATATTA---
NANTTATATATAANGN
 A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AACTATATATTA
TTAAGAACAATAAATT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AACTATATATTA
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AACTATATATTA
TTTAGAACAATAAAAT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACTATATATTA----
NAGCCATTAATTANTTA
 A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACTATATATTA----
NAGCCATTAATTANTTA
 A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AACTATATATTA-----
--GTATAAAAGGCGGGG
 C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AACTATATATTA
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AACTATATATTA-----
--GTATAAAAGGCGGGG
 C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACTATATATTA-
GGCCATAAATCAC
 C G T A C G T A A G T C A C G T C G T A A C G T C G T A C G A T C G T A A C G T A C G T C G T A A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C