Information for 7-CTAGACATCGCT (Motif 10)

A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
Reverse Opposite:
G T C A A C T G A T G C C T A G C G T A A C G T A C T G A C G T A G T C A G C T C G T A A C T G
p-value:1e-8
log p-value:-1.925e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets73.8 +/- 36.1bp
Average Position of motif in Background80.8 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTAGACATCGCT
TCTAGACA-----
 A C G T A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTAGACATCGCT
CGTCTAGACA-----
 A C G T A C G T A C G T A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTAGACATCGCT
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTAGACATCGCT
CCAGACAG----
 A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTAGACATCGCT
CCAGACRSVB--
 A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTAGACATCGCT
GCTATAAATAGC-
 A C G T A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTAGACATCGCT
BCAGACWA----
 A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTAGACATCGCT
ACTATAAATAGA-
 A C G T A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTAGACATCGCT
NGNTCTAGAACCNGV-
 A C G T A C G T A C G T A C G T A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTAGACATCGCT
----ACATTCCA
 A G T C A C G T C T G A A C T G C G T A A G T C G T C A A C G T A G T C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A