Information for 8-CCAGTGCATGCA (Motif 13)

A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A
Reverse Opposite:
G A C T A C T G A T G C G C T A C G A T T A C G A G T C C G T A G T A C C A G T A C T G A T C G
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.764
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif99.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets131.3 +/- 52.6bp
Average Position of motif in Background106.8 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CCAGTGCATGCA
NNNNTGCCAGTGATTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCAGTGCATGCA---
CCATTGTATGCAAAT
 A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCAGTGCATGCA-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGTGCATGCA
---GTGGAT---
 A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCAGTGCATGCA
TTTTCAGTGTGTGCA
 A C G T A C G T A C G T A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCAGTGCATGCA
ATGCCCGGGCATGT-
 A C G T A C G T A C G T A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCAGTGCATGCA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTGCATGCA
NTCAAGTGG-----
 A C G T A C G T A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTGCATGCA
NNCCATTGTNN---
 A C G T A C G T A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCAGTGCATGCA
TTRAGTGSYK---
 A C G T A T G C G T A C G T C A A C T G C G A T A C T G A T G C C G T A C G A T A T C G G T A C C T G A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T