Information for 1-TAGCMRCA (Motif 14)

A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A
Reverse Opposite:
A C G T A C T G G A T C C A T G A C T G T G A C A G C T T C G A
p-value:1e-6
log p-value:-1.567e+01
Information Content per bp:1.455
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif16.24%
Number of Background Sequences with motif4039.8
Percentage of Background Sequences with motif8.23%
Average Position of motif in Targets98.5 +/- 56.3bp
Average Position of motif in Background100.4 +/- 67.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAGCMRCA--
GTACCCGCATN
 A C G T A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TAGCMRCA--
TACCCGCATN
 A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAGCMRCA-----
TCGTACCCGCATCATT
 A C G T A C G T A C G T A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAGCMRCA---
-TGCSGCANTN
 A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T A C G T
A C G T A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TAGCMRCA---
AAACCACAGAN
 A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TAGCMRCA-
AAACCGCAA
 A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TAGCMRCA----
-GTCAGCANNTN
 A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TAGCMRCA--
AAACCGCAAA
 A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TAGCMRCA--
TTGCAACATN
 A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TAGCMRCA---
NWAACCACADNN
 A C G T A G C T T C G A A C T G T G A C G T A C C T A G T G A C T G C A A C G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C