Information for 9-AAATACTAAA (Motif 16)

C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C T G A C G T C T G A A C G T A C G T A C G T
p-value:1e-6
log p-value:-1.450e+01
Information Content per bp:1.929
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif83.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets96.2 +/- 51.3bp
Average Position of motif in Background100.7 +/- 46.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AAATACTAAA---
TACTAAGTACTTAAATG
 A C G T A C G T A C G T A C G T C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAATACTAAA----
AAATAAGAAAAAAC
 C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAATACTAAA
AAGCACTTAA
 C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AAATACTAAA--
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PB0106.1_Arid5a_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAATACTAAA---
CATACAATACGAAATAA
 A C G T A C G T A C G T A C G T C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAATACTAAA--
HDGYAATGAAAN
 C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

PH0116.1_Nkx2-9/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAATACTAAA---
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAATACTAAA---
AAAAATAACAAACGG
 A C G T A C G T C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAATACTAAA--
AATATTAATAAAGA
 A C G T A C G T C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAATACTAAA----
CATAACCACTTAACAAC
 A C G T A C G T A C G T C G T A C G T A G T C A A G C T C G T A A G T C A C G T G T C A C G T A C G T A A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C