Information for 10-RCVAGCMMDC (Motif 18)

T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C
Reverse Opposite:
A C T G G A T C A C T G A C T G T A C G G T A C C A G T A C G T C T A G A G C T
p-value:1e-5
log p-value:-1.227e+01
Information Content per bp:1.558
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif14.21%
Number of Background Sequences with motif3716.5
Percentage of Background Sequences with motif7.57%
Average Position of motif in Targets97.0 +/- 55.4bp
Average Position of motif in Background100.1 +/- 68.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RCVAGCMMDC
TBGCACGCAA--
 A C G T A C G T T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-RCVAGCMMDC
AGCGCGCC---
 A C G T T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RCVAGCMMDC
--CAGCC---
 T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RCVAGCMMDC
-CACGCA---
 T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-RCVAGCMMDC
GCCACGCCCCC
 A C G T T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C

KLF14/MA0740.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RCVAGCMMDC--
GGCCACGCCCCCTT
 A C G T A C G T T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C A C G T A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

SP8/MA0747.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RCVAGCMMDC-
GCCACGCCCACT
 A C G T T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C A C G T
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-RCVAGCMMDC-
GCCMCGCCCMCY
 A C G T T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C A C G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RCVAGCMMDC-
GCCACRCCCACY
 A C G T T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RCVAGCMMDC---
-YCCGCCCACGCN
 T C G A G A T C T G C A G T C A C A T G A T G C T G A C T G A C C T A G T G A C A C G T A C G T A C G T
A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A