Information for 13-TAGGTAGGTA (Motif 24)

A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A
Reverse Opposite:
A G C T C T G A A G T C G A T C A C G T C T G A A G T C G A T C A G C T C T G A
p-value:1e-4
log p-value:-1.113e+01
Information Content per bp:1.799
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif219.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets92.6 +/- 58.6bp
Average Position of motif in Background103.9 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)2.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TAGGTAGGTA-
CAGGTAAGTAT
 A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAGGTAGGTA-
AAGGCAAGTGT
 A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAGGTAGGTA--
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TAGGTAGGTA--
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTAGGTA----
NGTAGGTTGGCATNNN
 A C G T A C G T A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAGGTAGGTA--
TATAAGTAGGTCAA
 A C G T A C G T A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TAGGTAGGTA---
---VCAGGTRDRY
 A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

RORC/MA1151.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAGGTAGGTA-
ATAAGTAGGTCA
 A C G T A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TAGGTAGGTA-
--AACAGGTGT
 A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A A C G T
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAGGTAGGTA
ANAGATAAGAA
 A C G T A G C T C T G A C T A G C T A G A G C T C G T A C T A G C T A G G A C T C T G A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A