Information for 4-GACGGTGA (Motif 28)

A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A
Reverse Opposite:
G A C T T G A C C T G A G T A C A G T C T A C G A G C T T G A C
p-value:1e-4
log p-value:-9.281e+00
Information Content per bp:1.783
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif11.17%
Number of Background Sequences with motif2991.8
Percentage of Background Sequences with motif6.10%
Average Position of motif in Targets108.9 +/- 51.4bp
Average Position of motif in Background99.2 +/- 68.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GACGGTGA
GTGAAAGTGA
 A C G T A C G T A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A
C T A G C G A T A C T G C G T A G C T A G T C A C T A G A G C T C T A G C G T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GACGGTGA----
-CAGGTAAGTAT
 A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GACGGTGA-
TCAAGGTCAT
 A C G T A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACGGTGA
NNNANTGA
 A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GACGGTGA-
TCAGNGAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GACGGTGA-
NBYCAAGGTCAC
 A C G T A C G T A C G T A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GACGGTGA-
GGAGGGGGAA
 A C G T A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A A C G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACGGTGA-
TCAAGGTCAN
 A C G T A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

NR2F2/MA1111.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GACGGTGA--
CAAAGGTCAAA
 A C G T A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A A C G T A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GACGGTGA
--TGGGGA
 A C T G T C G A A T G C T C A G A C T G A G C T A C T G C T G A
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A