Information for 2-TTTCAGTTACTG (Motif 3)

A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C T G C G T A C G T A G T C A
p-value:1e-9
log p-value:-2.224e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets131.1 +/- 57.0bp
Average Position of motif in Background95.0 +/- 49.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTTACTG
AGTTTCAGTTTC--
 A C G T A C G T A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTACTG
ACTTTCACTTTC--
 A C G T A C G T A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:3
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TTTCAGTTACTG-
ACTYKNATTCGTGNTACTTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTACTG
ASTTTCASTTYC--
 A C G T A C G T A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTCAGTTACTG-------
---CAATCACTGGCAGAAT
 A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTCAGTTACTG
AGTTTCAKTTTC--
 A C G T A C G T A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTTCAGTTACTG
ASTTTCACTTCC--
 A C G T A C G T A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTCAGTTACTG
TGGTTTCAGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTTCAGTTACTG-----
-TNNTGCTACTGTNNNN
 A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTTCAGTTACTG
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T C A C T A G C G A T C G A T C G T A A G T C A C G T A C T G
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T