Information for 2-CTTTCCTTGG (Motif 4)

A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G
Reverse Opposite:
G A T C A G T C G T C A C G T A A C T G C A T G G C T A G C T A C G T A C T A G
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.819
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif6.09%
Number of Background Sequences with motif635.4
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets108.8 +/- 54.9bp
Average Position of motif in Background100.0 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCCTTGG
BNTGDCCTTG-
 A C G T A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTTTCCTTGG-
-TGACCTTGAV
 A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTTTCCTTGG-
-TGACCTTGAN
 A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCCTTGG----
GCTGACCTTGAACTN
 A C G T A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCCTTGG
NNACTTGCCTT--
 A C G T A C G T A C G T A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTTCCTTGG
CTGACCTTTG
 A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NFIC/MA0161.2/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTTTCCTTGG----
---TACTTGGCAGA
 A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTTCCTTGG
NNACTTACCTN--
 A C G T A C G T A C G T A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTTCCTTGG--
GTGACCTTGRVN
 A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G A C G T A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTTTCCTTGG
NTGACCTTGA
 A G T C G C A T C G A T C G A T G T A C A G T C C G A T A C G T C T A G C T A G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A