Information for 3-TGAGTGGTGG (Motif 6)

C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
Reverse Opposite:
A G T C G A T C C T G A G T A C A G T C C G T A G T A C C G A T G A T C C G T A
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.830
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.06%
Number of Background Sequences with motif279.1
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets117.8 +/- 44.2bp
Average Position of motif in Background95.7 +/- 69.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGAGTGGTGG
TTRAGTGSYK-
 A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTGGTGG
CTTGAGTGGCT-
 A C G T A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGGTGG
TTAAGTGGT--
 A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGGTGG
TTGAGTGSTT-
 A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGGTGG
TTAAGTGGN--
 A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGGTGG-
CAGTGTGGTCGC
 A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGGTGG
TTAAGTGCTT-
 A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTGGTGG
CTYRAGTGSY--
 A C G T A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTGGTGG
NCTGATTGGNN-
 A C G T A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGAGTGGTGG
BTBRAGTGSN--
 A C G T A C G T C G A T C T A G C G T A A C T G C G A T A C T G C A T G G A C T C T A G A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T