Information for 9-CCAAACCATA (Motif 17)

G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A
Reverse Opposite:
G A C T G C T A C A G T C A T G C A T G G C A T G A C T C A G T A C T G C A T G
p-value:1e-8
log p-value:-2.010e+01
Information Content per bp:1.660
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif7.99%
Number of Background Sequences with motif1255.7
Percentage of Background Sequences with motif2.55%
Average Position of motif in Targets87.1 +/- 55.2bp
Average Position of motif in Background97.6 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCAAACCATA-
-NAAACCACAG
 G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCAAACCATA--
--AAACCACANN
 G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCAAACCATA---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCAAACCATA---
--AAACCACAGAN
 G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCAAACCATA--
--AAACCACAGC
 G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCAAACCATA---
-NWAACCACADNN
 G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACCATA
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCAAACCATA--
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCAAACCATA---
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAAACCATA----
TGCCAAAATAAACANN
 A C G T A C G T G T A C T G A C G T C A C T G A C G T A G T A C G T A C G T C A C G A T C T G A A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A