Information for 12-TATACGGGACAT (Motif 20)

C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T
Reverse Opposite:
C G T A A C G T C T A G A C G T A G T C A G T C G T A C A C T G A C G T C G T A A G C T C G T A
p-value:1e-8
log p-value:-1.890e+01
Information Content per bp:1.807
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets111.1 +/- 43.7bp
Average Position of motif in Background82.1 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TATACGGGACAT-
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

PB0078.1_Srf_1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TATACGGGACAT
TTCCATATATGGAA---
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TATACGGGACAT-----
-NNATTGGACTTTNGNN
 C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TATACGGGACAT
CCATATATGGNA---
 A C G T A C G T A C G T C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T A C G T A C G T

ETV2/MA0762.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TATACGGGACAT-
--AACCGGAAATA
 C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T A C G T
A C G T A C G T C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A

RORC/MA1151.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TATACGGGACAT
ATAAGTAGGTCA-
 A C G T C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:7
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TATACGGGACAT
CATACAATACGAAATAA
 A C G T A C G T A C G T A C G T A C G T C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

ERG/MA0474.2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TATACGGGACAT-
---ACCGGAAGTG
 C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T A C G T
A C G T A C G T A C G T C G T A T G A C T G A C C T A G A C T G G T C A G C T A T C A G A G C T T A C G

RORB/MA1150.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TATACGGGACAT
-AATTAGGTCAC
 C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T
A C G T C G T A G C T A C G A T A C G T C T G A A C T G C T A G A G C T G A T C C T G A G A T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TATACGGGACAT
--NACAGGAAAT
 C G A T C T G A A C G T C G T A G T A C A C T G A C T G C T A G C G T A A G T C G T C A A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T