Information for 4-ATTGAGGA (Motif 27)

C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A
Reverse Opposite:
A G C T T A G C G T A C G A C T A T G C G C T A G T C A G A C T
p-value:1e-6
log p-value:-1.443e+01
Information Content per bp:1.618
Number of Target Sequences with motif145.0
Percentage of Target Sequences with motif31.32%
Number of Background Sequences with motif10562.0
Percentage of Background Sequences with motif21.48%
Average Position of motif in Targets103.9 +/- 55.2bp
Average Position of motif in Background100.3 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATTGAGGA
TATTGAYY-
 A C G T C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A
G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAGGA
NTATCGATTA
 A C G T A C G T C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGAGGA----
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T A C G T C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ATTGAGGA--
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTGAGGA
TTTGATTGATGN
 A C G T A C G T A C G T A C G T C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

SPIB/MA0081.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATTGAGGA-
--AGAGGAA
 C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A A C G T
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTGAGGA-
ATGATKGATGRC
 A C G T A C G T A C G T C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

CUX2/MA0755.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAGGA
TTATCGATTA
 A C G T A C G T C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATTGAGGA---
-GGGAGGACNG
 C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A A C G T A C G T A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATTGAGGA-
TATCGATNAN
 A C G T C T G A C A G T C G A T T A C G C T G A C A T G A T C G T C G A A C G T
A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A