Information for 23-TTGGGTACTTTG (Motif 37)

A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A C G T A A C T G A C G T C T G A A G T C A G T C A T G C C G T A C G T A
p-value:1e-4
log p-value:-1.003e+01
Information Content per bp:1.935
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.5 +/- 49.8bp
Average Position of motif in Background75.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTGGGTACTTTG--
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGGGTACTTTG--
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGGGTACTTTG--
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGTACTTTG
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTGGGTACTTTG--
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTGGGTACTTTG------
---TGGACTTTGNNCTCN
 A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TTGGGTACTTTG-------
---TGGACTTTGNNCTNTG
 A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGGGTACTTTG-
-AGGVNCCTTTGT
 A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TTGGGTACTTTG----
-----NNCTTTGTTNN
 A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGTACTTTG-
NNNTTTGTTTACTTTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G C T C G T A A G T C A C G T A C G T A C G T A T C G A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T