Information for 7-GCCCCTGACACT (Motif 6)

A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T A C T G A C G T A T G C C G T A A C T G A C T G A C T G A T C G G T A C
p-value:1e-9
log p-value:-2.287e+01
Information Content per bp:1.889
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets106.1 +/- 53.8bp
Average Position of motif in Background87.5 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCTGACACT
CGCCCCCTGACA--
 A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCCCCTGACACT
--VGCTGWCAVB
 A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PBX3/MA1114.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCCCCTGACACT-----
NNNCCTGTCACTCANNN
 A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCCCCTGACACT
----TTGACAG-
 A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

ZNF282/MA1154.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCCCTGACACT--
CTTTCCCACAACACGAC
 A C G T A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T A C G T A C G T
A T G C G C A T C G A T C A G T A T G C A G T C A T G C G T C A G A T C C G T A C G T A A T G C G T C A A G T C C A T G C T G A A T G C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCCCCTGACACT
ATCCCCGCCCCTAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCCCTGACACT--
AAGCACCTGTCAATAT
 A C G T A C G T A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCCCCTGACACT-
-----TGACACCT
 A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCTGACACT
TGACCTTGACCT-
 A C G T A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCCCTGACACT
--ARNTGACA--
 A C T G A T G C A G T C A G T C A G T C A C G T A T C G G T C A G T A C C G T A A G T C A G C T
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T