Information for 9-TTTTATGTAM (Motif 12)

A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A
Reverse Opposite:
C A G T C G A T C G T A G T A C G T C A C G A T G T C A C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.215e+01
Information Content per bp:1.874
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif5.42%
Number of Background Sequences with motif364.7
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets79.6 +/- 55.2bp
Average Position of motif in Background99.2 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:TTTTATGTAM---
--TTATGTAACAT
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T A C G T
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

TEF/MA0843.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTTATGTAM--
NGTTACGTAATN
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTTTATGTAM-
-RTTATGYAAB
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

HLF/MA0043.2/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTATGTAM--
NGTTACGTAANN
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T
C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTTTATGTAM-
CTTTGATGTGSB
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T

DBP/MA0639.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTATGTAM--
NGTTACGTAATN
 A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T
A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTTTATGTAM
CCTTTGATST--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TTTTATGTAM-
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATGTAM--
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TTTTATGTAM-
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T C G T A G T C A A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A