Information for 3-RRTTTTCCKTTM (Motif 4)

C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A
Reverse Opposite:
A C G T C G T A G T C A G T C A A C T G A C T G C G T A C G T A C G T A C G T A G A C T A G T C
p-value:1e-9
log p-value:-2.142e+01
Information Content per bp:1.866
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif80.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets110.0 +/- 48.9bp
Average Position of motif in Background104.1 +/- 53.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC3/MA0625.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:RRTTTTCCKTTM
-ATTTTCCATT-
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:RRTTTTCCKTTM
-ATTTTCCATT-
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:RRTTTTCCKTTM
-ATTTTCCATT-
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:RRTTTTCCKTTM
-ATTTTCCATT-
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:forward strand
Alignment:RRTTTTCCKTTM
--TTTTCCA---
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:RRTTTTCCKTTM--
CAGTTTCGNTTCTN
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:RRTTTTCCKTTM-
-AGTTTCAKTTTC
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A A C G T
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:RRTTTTCCKTTM
----TTCCTCT-
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:RRTTTTCCKTTM-
-ASTTTCASTTYC
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A A C G T
A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:RRTTTTCCKTTM
---CTTCCGGT-
 C T A G C T G A A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C G T A C G T G T C A
A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T