Information for 2-AAGCCCTGCA (Motif 5)

G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
Reverse Opposite:
C G A T A C T G A G T C C G T A A C T G A C T G A T C G G T A C A C G T C G A T
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.846
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif7.83%
Number of Background Sequences with motif366.4
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets116.1 +/- 37.7bp
Average Position of motif in Background95.9 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGCCCTGCA
-AGGCCTNG-
 G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGCCCTGCA
AAATCACTGC-
 A C G T G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGCCCTGCA-----
AATCGCACTGCATTCCG
 A C G T A C G T G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGCCCTGCA
TAATCCCN---
 A C G T G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGCCCTGCA
AAATCACAGCA
 A C G T G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGCCCTGCA
-AGGCCTAG-
 G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------AAGCCCTGCA
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AAGCCCTGCA-
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGCCCTGCA
CTTAATCCC----
 A C G T A C G T A C G T G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGCCCTGCA
ATAATCCC----
 A C G T A C G T G C T A C G T A A C T G A T G C A G T C G T A C A C G T C T A G G T A C G C T A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T