Information for 4-AAATTAAGAG (Motif 7)

C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
Reverse Opposite:
A T G C A G C T A T G C A C G T G A C T C T G A C G T A C G A T A C G T C G A T
p-value:1e-8
log p-value:-2.048e+01
Information Content per bp:1.842
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif6.63%
Number of Background Sequences with motif247.8
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets92.9 +/- 65.1bp
Average Position of motif in Background94.2 +/- 55.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAATTAAGAG--
TTCAAAWTAAAAGTC
 A C G T A C G T A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G A C G T A C G T
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAATTAAGAG
NTAATTAATAT
 A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

LMX1B/MA0703.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAGAG
TTAATTAA---
 A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
A C G T G A C T C G T A G C T A C G A T C G A T G C T A T C G A A C G T A C G T A C G T

LMX1A/MA0702.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAGAG
TTAATTAA---
 A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
A G C T G A C T C T G A G C T A G C A T C G A T C T G A T C G A A C G T A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAGAG
CTAATTAA---
 A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
A G T C G A C T T C G A G T C A A G C T G A C T G C T A T C G A A C G T A C G T A C G T

PH0153.1_Prop1/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AAATTAAGAG--
CGAATTAATTAAGAAAC
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

SHOX/MA0630.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAATTAAGAG
NCAATTAN---
 A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A A C G T A C G T A C G T

UNCX/MA0721.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAGAG
CTAATTAA---
 A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAGAG
CTAATTAA---
 A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAATTAAGAG
GTAATTAA---
 A C G T C G T A G T C A C G T A A C G T G A C T C T G A C G T A A T C G C T G A A T C G
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T