Information for 4-TGCCTGTTGAGA (Motif 8)

A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C C G T A G T C A A G T C C G T A A C T G A C T G G T A C C G T A
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.919
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.5 +/- 59.2bp
Average Position of motif in Background147.7 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGCCTGTTGAGA
--CCTGCTGAGH
 A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGTTGAGA--
TNTCCTGCTGTGNNG
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGTTGAGA
CCCCCTGCTGTG-
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCCTGTTGAGA--
--GGTGYTGACAGS
 A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A A C G T A C G T
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGTTGAGA--
TCNCCTGCTGNGNNN
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTGTTGAGA
ACTTCCTGTT----
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTGTTGAGA
ATTTCCTGTN----
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGTTGAGA--
NNTCCTGCTGTGNNN
 A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCCTGTTGAGA
CACCTGTTGC--
 A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGCCTGTTGAGA
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C T A G C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C