Information for 18-ACAATGCCCC (Motif 16)

C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
Reverse Opposite:
C T A G A T C G A C T G A C T G A G T C T C G A A C G T A C G T A C T G A C G T
p-value:1e-12
log p-value:-2.885e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif9.38%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets122.2 +/- 60.5bp
Average Position of motif in Background89.8 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ACAATGCCCC--
ACAAAGGNBCCT
 C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C A C G T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACAATGCCCC
AAACAATGGCA-
 A C G T A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGCCCC
VRRACAAWGG---
 A C G T A C G T A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGCCCC
RNAACAATGG---
 A C G T A C G T A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACAATGCCCC
ACTACAATTCCC-
 A C G T A C G T A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGCCCC
GACAATGNN--
 A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGCCCC
VRAACAATGG---
 A C G T A C G T A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGCCCC
AAAACAATGG---
 A C G T A C G T A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACAATGCCCC
RAACAATGGN--
 A C G T A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGCCCC
RACAAWGG---
 A C G T C G T A G T A C G T C A C G T A A G C T C T A G A G T C A G T C A T G C A G T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T