Information for 22-TGTATTATATAC (Motif 19)

A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T C T G A A C G T C G T A C G T A A C G T C G T A A G T C C G T A
p-value:1e-9
log p-value:-2.076e+01
Information Content per bp:1.941
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets103.5 +/- 61.8bp
Average Position of motif in Background99.0 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGTATTATATAC--
CCGTATTATAAACAA
 A C G T A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

NFIL3/MA0025.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGTATTATATAC
-ANGTTACATAA
 A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C
A C G T C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTATTATATAC---
NANTTATATATAANGN
 A C G T A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTATTATATAC
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTATTATATAC
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTATTATATAC
TGAATTATGCAT
 A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTATTATATAC---
NCGTATTATAATCNTA
 A C G T A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

TEF/MA0843.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGTATTATATAC--
--TATTACGTAACA
 A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TGTATTATATAC
TNNTTTCGTATTNNANN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G A C G T

DBP/MA0639.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTATTATATAC--
--NGTTACGTAATN
 A C G T A C T G A C G T C G T A C G A T A C G T C G T A A G C T C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A