Information for 7-ATCATCAAAT (Motif 2)

C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T
Reverse Opposite:
C T G A C G A T G C A T A G C T A C T G C T G A C A G T A C T G C G T A A C G T
p-value:1e-39
log p-value:-9.107e+01
Information Content per bp:1.852
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif39.06%
Number of Background Sequences with motif183.3
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets125.3 +/- 43.5bp
Average Position of motif in Background116.1 +/- 101.3bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATCATCAAAT
GTCGTAAAAT
 C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCATCAAAT--
HWWGTCAGCAWWTTT
 A C G T A C G T A C G T C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATCATCAAAT-
GTCAGCANNTN
 C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATCATCAAAT
TAGTGATCATCATTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATCATCAAAT
---ATTAAA-
 C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATCATCAAAT
GTCGTAAAAA
 C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----ATCATCAAAT--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATCATCAAAT-
GGTCGTAAAATT
 A C G T C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATCATCAAAT-----
TATAGATCAAAGGAAAA
 A C G T A C G T C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCAAAT-
NGTCAGCANTTT
 A C G T C G T A A C G T G T A C G T C A A G C T T A G C T C G A C G T A C G T A A G C T A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T