Information for 9-TGTGTTCAACTC (Motif 5)

A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G C T A C G T A C T G C G T A C G T A A G T C C T G A A G T C C G T A
p-value:1e-26
log p-value:-6.152e+01
Information Content per bp:1.919
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.1 +/- 69.0bp
Average Position of motif in Background109.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTGTTCAACTC
TGAGTTCA----
 A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTGTTCAACTC
CCATTGTATGCAAAT-
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGTGTTCAACTC--
----ACCAACTGTC
 A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGTGTTCAACTC-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTTCAACTC
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTTCAACTC
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----TGTGTTCAACTC-
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGTGTTCAACTC----
NNAGTCCCACTCNNNN
 A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----TGTGTTCAACTC
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TGTGTTCAACTC
--NATTCAAAT-
 A C G T A C T G A G C T C T A G A C G T A C G T A G T C C G T A C T G A A G T C A C G T A G T C
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T