Information for 15-TTCAWAGAGCAG (Motif 11)

A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G G T A C A C G T G T A C C G A T G C A T A C G T A T C G C G T A C G T A
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif19.35%
Number of Background Sequences with motif132.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets72.3 +/- 35.2bp
Average Position of motif in Background102.1 +/- 89.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTCAWAGAGCAG
CGGTTTCAAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTCAWAGAGCAG
ACATCAAAGG----
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCAWAGAGCAG
--CAAAGGTCAG
 A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTCAWAGAGCAG
ASATCAAAGG----
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCAWAGAGCAG
NATTCAAAT-----
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TTCAWAGAGCAG
AAAGATCAAAGGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTCAWAGAGCAG
ACWTCAAAGG----
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCAWAGAGCAG
GGGGTCAAAGGTCA-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCAWAGAGCAG
GAGGTCAAAGGTCA-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TTCAWAGAGCAG
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C T G T C G A A C T G A G T C C G T A A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T