Information for 16-AGACCTCTTTGA (Motif 13)

C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A C T G A A C T G C G T A A C T G A C T G A C G T A G T C C G A T
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.935
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif9.68%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets146.0 +/- 36.3bp
Average Position of motif in Background110.3 +/- 101.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORB/MA1150.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGACCTCTTTGA
NTGACCTAATT--
 A C G T C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGACCTCTTTGA
TGACCYCT----
 C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGACCTCTTTGA-----
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGACCTCTTTGA
TGACCTARTT--
 C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGACCTCTTTGA
TGACCTARTT--
 C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGACCTCTTTGA
TGACCTTGAT--
 C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

RORC/MA1151.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGACCTCTTTGA
TGACCTANTTAN
 C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGACCTCTTTGA---
TGAACCCGATGACCC
 C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGACCTCTTTGA
TGACCTYA----
 C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGACCTCTTTGA
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A G T C A C G T A G T C A G C T A C G T A C G T A C T G C G T A
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A