Information for 19-CYCAAARTATGT (Motif 17)

A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C G T C T G A A G T C A G C T A C G T A C G T A C T G T C A G C T A G
p-value:1e-5
log p-value:-1.240e+01
Information Content per bp:1.728
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif19.35%
Number of Background Sequences with motif507.8
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets136.6 +/- 52.6bp
Average Position of motif in Background99.3 +/- 77.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CYCAAARTATGT-
---AACATATGTC
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T
A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CYCAAARTATGT-
---AACATATGTT
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T
A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CYCAAARTATGT--
--AAACATATGTTT
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CYCAAARTATGT-
---NTGGAATGTG
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T
A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CYCAAARTATGT---
----AAGGATATNTN
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CYCAAARTATGT-
---NTGGAATGTN
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T
A C G T A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CYCAAARTATGT-
---AACATATGTT
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T
A C G T A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CYCAAARTATGT-
---ACCATATGTT
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CYCAAARTATGT
---NAACAAT--
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CYCAAARTATGT------
---AAAACCTGGANHGGR
 A G T C A G T C G T A C C G T A C G T A C T G A T C A G G A C T G T C A A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G